CDS

Accession Number TCMCG080C30888
gbkey CDS
Protein Id XP_027904081.1
Location join(2481813..2482148,2482236..2482327,2484805..2484890,2484972..2485108,2485629..2485703,2486170..2486261,2486647..2486798,2487330..2487367,2487449..2487455,2487609..2487764,2488011..2488086,2488884..2489008,2489097..2489131,2489228..2489286,2489871..2489954,2490116..2490211,2490310..2490358,2490471..2490558,2490650..2490853,2491248..2491373,2491472..2491571,2491656..2491761,2492131..2492258,2492389..2492550,2493855..2494010,2495169..2495877)
Gene LOC114163900
GeneID 114163900
Organism Vigna unguiculata

Protein

Length 1157aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA521068
db_source XM_028048280.1
Definition DNA ligase 4 isoform X1 [Vigna unguiculata]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction R00381        [VIEW IN KEGG]
KEGG_rclass RC00005        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10777        [VIEW IN KEGG]
EC 6.5.1.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03450        [VIEW IN KEGG]
map03450        [VIEW IN KEGG]
GOs GO:0000726        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003909        [VIEW IN EMBL-EBI]
GO:0003910        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006266        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006297        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006303        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010165        [VIEW IN EMBL-EBI]
GO:0010212        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016886        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032807        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048046        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051103        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGACGGAGCAAACCAAATTCAGCGTGTTGTGCAGCCTCTTCACGTGGACGCAGCGGAGCAAGTCGGCGGCGAAGAAGCGCTCCAAGTTCCGCAAGTTCCTCGACGTCTTCTGCATTGACCGCAACTTCTTCCCTGCCATTCGCCTCATTCTCCCCAACCTCGATCGCGAGCGTGGCTCCTACGGCCTCAAGGAGTCCGTTCTCGCCACCTCTCTCATCGACGCCCTCGGCATCTCCCGTGACTCCCCCGATGCCCTCCGACTCATCAACTGGCGTAAGGGTGGCGCCGCCACCGGCGCTACAGCCGGAAATTTCGCCCTCGTCGCCGCCGAGGTGCTTCACAGCAGGCAAGGGACCGCTTCGGGAGGGTTGACGATAAAGGAGTTGAATGAGTTGCTTGACCGGTTGGCTTCCGGTGAAAACAGGGCTGAGAAAATTTTGGTTCTTTCTACCCTTATCCAAAAGACAAATGCACAGGAAATGAAGTGGATTATCATGATAATCCTGAAAGATCTAAAGCTGGGAATTAGTGAAAAAAGCATTTTTCATGAGTTCCATCCTGATGCAGAAGACTTGTTTAACGTTACCTGTGACTTAAAATTAGTATGTGAAAAGCTAAGGGATCGGAATCAGCGGCATAAGCGGCAGGATATTGAAGTTGGGAAAGCTGTGCGCCCCCAATTAGCTAAGAGAGTTGCTAATGCAACTGAAGCATGGAAGAAGCTTCATGGGAAGGAAGTGGTTGTTGAATGCAAATTTGATGGCGACCGAATTCAAATTCATAAAAATGGAACTGAGATACATTTTTTCTCAAGGAACTTTATTGATCATTCTGAATATGCACATGCAATGTCAGAAATCATAATGCAAAATATTCTTGTAGATAGGTGTATCCTTGATGGTGAAATGTTGGTGTGGGACACATCCTTAAAACGCTTTGCTGAGTTTGGCTCAAATCAGGAAATAGCCAAGGCAGCAAGAGATGGACTTGATAGTGACAGACAGTTATGCTATGTTGCGTTTGATATCCTTTATTTCGGAGATACTAGTGTGATTCACCAATCTTTGAAGGAAAGACATGAGATATTATGTAAAGTTGTTAGGCCAATGAAGGGACGATTGGAAATTTTGGTACCTAATGCTGGTATCAACAGTCATCTTACTTCAGGTGAACCTTGTTGGTCATTTATTGCTCATAATGTTGATGAAGTTGAGAGGTTTTTCAAGGAAACCATTGAAAATAGAGATGAGGGAATTGTTTTAAAGGACCGCAGCTCTAAATGGGAACCTAGTGATCGTAGTGGGAAGTGGTTAAAATTGAAGCCTGAATACATTCAAGCTGGCTCTGATTTGGATGTACTTATCATAGGTGGCTACTATGGTTCTGGACGACGTGGAGGACAGGTTGCTCAATTCTTGGTTGGCCTTGCAGAACGTCCATCTCCAAATGCACAACCTAAGCGGTTTATATCCTTTTGCAGAGTTGGCACTGGACTCTCTGATGAGGAGCTTGACGTTGTAGTAACCAAACTAAAACCGTACTTCAGAAAGTATGAATATCCAAAGAAGAGGCCACCAAGTTTTTATCAAGTAACTAATCATTCAAAAGAAAGACCTGATGTGTGGGTTGATAGCCCTGAGAAATCAATTATTCTGTCTATTACCAGTGATATCCGAACTATAGAATCTGAGGTATTTGCTGCACCTTACAGCCTGAGATTTCCTAGGATTGACAGGGTGAGATATGACAAAGCTTGGAACGAATGCCTTGACGTTCAATCTTTTATAGAACTAGTGCATTCTAGCAATGGTACCACACAGAGGGATACAGAATATGGCAGCAAACAGGACAGTAAACCAAAAAGAACGAAATCCTCCACTAGGGGAGAAAAGAGAAACATGTCCATTGTTCCTTCTCATTTAATTCAAACTGATATTTCCAGCGTTAAGGGGGGCTCCTTAATATTTTCAAATATGATGTTCTACTTTGCTAATGTGCCTCCATCGCATTCTCTTGAGTCCTTGCACAAAATAATTGCTGAGAGTGGGGGAACTTTTTCAATGAATTTGAACAACTCAGTCACACATTGTGTTGCCGCAGGCAGCAAGGGCTTTAAATTTGAAGCAGCAAAGCGTCATGGTGATATTATTCATTATTCTTGGGTACTAGACTGTTATGAACAAAAAAAGCTTGTCTGCTTACAGCCTAAGTACTTCCTTTTCCTATCTGAACTGACAAAGAAGAAGTTCCGAGAAGAAATTGATGAGTTCTCAGATTCTTTCTACTTGGACCTAGATCTTGAAGACATCAAGCAGCTCTTGAGCAATATTAGTAAGTCTGAAGATGTCAGCACTGTCGATCATTACAGGAAAAAATACTGCCCAAAGGATAAGTGGTCTTTCTTTTGTGGATGTTCAATTTATTTCCACACTGCAATACCTATGAAAGGAGATTGGCATTATATATTACAAGTTGCTTTGAGGAGATTCAAGCTTGAAGTTCTCATGGGTGGTGGAAAAGTTACCTCTAATCTTACTTGTGCAACCCATTTAGTGGCCTTTCTTGTGCCAGGATGTCGAACTGAATTTGAACAAATACTGAGTAGTTTCACTTCAGTGGAAAGAAAAATTCTCCAAAGCAAGAGGTTGTATATAGTTAATTCCCAGTGGCTGGAAGATTGTTCAGACAGTAATAAAAGATTACCAGAAGACTCTTACAGTTTGAAGCCCTGGGGAATAGAAGAGACAACTGCTGCAGATTGTGAACAGGACTTGGCGTTAGAGGCTCATCTGTGTGGAGATAATACACAAGACCAAAATACATCTTTCTCTGACAAGGGAAATCGTCAAAGAAGTGAAAAAGTTGCATGCGAAGACAGTACGGCCTTCTTATCCCAAGAGAAGGGTATCAAAAGGAAAAGAGGAAGACCTGTTGGCAGTGGTATAAAAAATGTAAAACCAGCTGCCAAACAAACTCGAAGAGCACGACCACAAAATGTGAGAAAGCCTGCTAAAATATGTGAATATGAATCACCGGATGAAAGTGAGTCTCGTGACAAGAGACCATTTGAAAGTCTCGACTTTTATGAGAAACATTCAGAACCCCAGGAGAATGAGGAACAGAAAAATGTCGAAGTTGCTGGGACAGTGGAAAGTTCTGAACAAAATAAAGTTGACAACAAGCTTAAGGACTTGAAGGACAATGATCATGAAATAGAAATGACTGATAGGTACAATGACCACAACAATGAGGTGGTAGAGAAATTAGACTTTTCTGCTGACCCCCTTCAGGCGATGTTATTTGACATGATTCCTAGTCTTGGCACCCAAAAAGTTGAGCAACCTGTGAATCCTAGTGTTAGAGAAGAGAAGGTAGCAGAAACCTCCAATGCAGAAACAGTGCCTACAACTACAAAGAAAAATAAGGTTAGCTTCTTGGATGCTGCCAATGAGCTGCTGAAGGACTGGTAG
Protein:  
MATEQTKFSVLCSLFTWTQRSKSAAKKRSKFRKFLDVFCIDRNFFPAIRLILPNLDRERGSYGLKESVLATSLIDALGISRDSPDALRLINWRKGGAATGATAGNFALVAAEVLHSRQGTASGGLTIKELNELLDRLASGENRAEKILVLSTLIQKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANATEAWKKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFIDHSEYAHAMSEIIMQNILVDRCILDGEMLVWDTSLKRFAEFGSNQEIAKAARDGLDSDRQLCYVAFDILYFGDTSVIHQSLKERHEILCKVVRPMKGRLEILVPNAGINSHLTSGEPCWSFIAHNVDEVERFFKETIENRDEGIVLKDRSSKWEPSDRSGKWLKLKPEYIQAGSDLDVLIIGGYYGSGRRGGQVAQFLVGLAERPSPNAQPKRFISFCRVGTGLSDEELDVVVTKLKPYFRKYEYPKKRPPSFYQVTNHSKERPDVWVDSPEKSIILSITSDIRTIESEVFAAPYSLRFPRIDRVRYDKAWNECLDVQSFIELVHSSNGTTQRDTEYGSKQDSKPKRTKSSTRGEKRNMSIVPSHLIQTDISSVKGGSLIFSNMMFYFANVPPSHSLESLHKIIAESGGTFSMNLNNSVTHCVAAGSKGFKFEAAKRHGDIIHYSWVLDCYEQKKLVCLQPKYFLFLSELTKKKFREEIDEFSDSFYLDLDLEDIKQLLSNISKSEDVSTVDHYRKKYCPKDKWSFFCGCSIYFHTAIPMKGDWHYILQVALRRFKLEVLMGGGKVTSNLTCATHLVAFLVPGCRTEFEQILSSFTSVERKILQSKRLYIVNSQWLEDCSDSNKRLPEDSYSLKPWGIEETTAADCEQDLALEAHLCGDNTQDQNTSFSDKGNRQRSEKVACEDSTAFLSQEKGIKRKRGRPVGSGIKNVKPAAKQTRRARPQNVRKPAKICEYESPDESESRDKRPFESLDFYEKHSEPQENEEQKNVEVAGTVESSEQNKVDNKLKDLKDNDHEIEMTDRYNDHNNEVVEKLDFSADPLQAMLFDMIPSLGTQKVEQPVNPSVREEKVAETSNAETVPTTTKKNKVSFLDAANELLKDW